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原标题:Efficient Fisher s Exact Test in Java

I need a library/function/method to perform a Fisher s exact test in Java, and provide the right, left and two-tailed probabilities. Simple Googling shows a solution within the packages of Tassel, but the method inside simply applies the test steps with no optimization, and therefore it s extremely slow. Moreover, it uses int types everywhere and it s not really efficient for big contingency tables.

如果你知道任何已经书面的解决办法,帮助我:

最佳回答

See if this helps:

The formula is quite simple. There s a very simple (two-tailed) implementation here: http://javanus.com/blogs/?p=51 (see the comment by Discretoboy for a much cleaner implementation)

也可在瓦 Java统计班次中查看

问题回答

I use http://wordhoard.northwestern.edu/userman/javadoc/edu/northwestern/at/utils/math/statistics/FishersExactTest.html

A (very) brief test showed it to be similar in speed to the Java Statistical Classes (jsc) test mentioned above but it had the additional advantage of not giving me an illegal argument exception when my table included zero, which I believe is a legitimate case.





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