English 中文(简体)
Sweave, 包括源 R- 功能文件
原标题:Sweave, include sourced R-Function files

我有一个Rjob Writern 在文件 a. R 中, 它调用函数 写入文件 b. R, 和一个 snw 文件 c. snw。 我通过“ R CMD c. snw” 调用 c. snw 。

我正在寻找一个假名, 仅通过 SweaveInput{a.R} 将 a. R. 包括到 c. snw, 但从 a. R 调用的函数代码也应写入 tex 文件 。 这意味着 Sweave 跟踪包含的主 R 文件( 这里为 a. R) 中的所有源( ) 命令 。

有人能建议怎么做吗?

问题回答

我想在这种情况下,使用 knitr 软件包的生活会更容易些。 您可以将 a.R 读成块 label-a , 并写入 c.Rnw :

<<read-code>>=
read_chunk( a.R , labels =  label-a )
@
<<label-a>>
@

当您用 library( knir) 编译 c. Rnw (knir); knit (c. Rnw) , , a.R 将包含在结果中(这相当于复制 & amp; 粘贴代码进入块 label-a 中)。 这被称为 < a href=" http://yiuihui. name/ knitr/ demo/ externalization/" rel="nol=" >code 外部化 在 knitr 中。

SweaveInput/code> 不用于输入 R 源代码; 您只能输入 Rnw 文档 。

我敢肯定,如果你在 source ("b.R",回声=TRUE) (a.R )中使用 source ("b.R",回声=TRUE) (a.R )。





相关问题
How to plot fitted model over observed time series

This is a really really simple question to which I seem to be entirely unable to get a solution. I would like to do a scatter plot of an observed time series in R, and over this I want to plot the ...

REvolution for R

since the latest Ubuntu release (karmic koala), I noticed that the internal R package advertises on start-up the REvolution package. It seems to be a library collection for high-performance matrix ...

R - capturing elements of R output into text files

I am trying to run an analysis by invoking R through the command line as follows: R --no-save < SampleProgram.R > SampleProgram.opt For example, consider the simple R program below: mydata =...

R statistical package: wrapping GOFrame objects

I m trying to generate GOFrame objects to generate a gene ontology mapping in R for unsupported organisms (see http://www.bioconductor.org/packages/release/bioc/vignettes/GOstats/inst/doc/...

Changing the order of dodged bars in ggplot2 barplot

I have a dataframe df.all and I m plotting it in a bar plot with ggplot2 using the code below. I d like to make it so that the order of the dodged bars is flipped. That is, so that the bars labeled "...

Strange error when using sparse matrices and glmnet

I m getting a weird error when training a glmnet regression. invalid class "dgCMatrix" object: length(Dimnames[[2]]) must match Dim[2] It only happens occasionally, and perhaps only under larger ...

Generating non-duplicate combination pairs in R

Sorry for the non-descriptive title but I don t know whether there s a word for what I m trying to achieve. Let s assume that I have a list of names of different classes like c( 1 , 2 , 3 , 4 ) ...

Per panel smoothing in ggplot2

I m plotting a group of curves, using facet in ggplot2. I d like to have a smoother applied to plots where there are enough points to smooth, but not on plots with very few points. In particular I d ...